Prof. Zhendong Liu

Email: liuzd2000@126.com

 

Research Interests

 

Bioinformatics/Computational Biology, Algorithm Analysis and Design of AI

 

Education

 

Nov   2018 - Nov 2019

Harvard   University , University of California, Los Angeles, Visiting Scholar 

Sept   2011 – Jun 2014

 

Shandong   University, PhD in Computer Science and Technology

Thesis: Studies on Algorithms   for RNA Structure Prediction including Pseudoknots

 

Sept   2002 – Jun 2005

Shandong   University, MSc in Computer Science and Technology

Thesis:   Studies on Predicting Algorithms of RNA Secondary Structure

Sept   1990–Jun   1994

Shandong   Normal University, BSc in Mathematics

 

 

Research Grants

 

  2017 awarded RMB 630,000 from the National Natural Science Foundation of China (No. 61672328) to explore Predicting Algorithm and Complexity of RNA Folding Structure including Pseudoknots as the Principal Investigator (PI).

  2020 awarded RMB 500,000 from the Luoyang Branch of Henan Tobacco Monopoly Administration Bureau(Investigator)

 

Selected Publications

 

(1)    Zhendong Liu*,Yurong Yang,Dongyan Li, Xinrong Lv, Xi Chen,Qionghai Dai.(2021). Prediction of RNA tertiary structure based on random sampling strategy and parallel mechanism. Frontiers in Genetics, section Computational Genomics. (Q2)

(2)    Mengting Niu, Jin Wu, Quan Zou, Zhengdong Liu*, Lei Xu. (2021)Predicting RNA-binding proteins using deep learning. IEEE Journal of Biomedical and Health Informatics, 25(9):3668-3676 (Q1)

(3)    Zhendong Liu*, Dongyan Li, Yurong Yang, Xi Chen Xinrong Lv, Xiaofeng Li(2021). Design and Implementation of the Optimization Algorithm in the Layout of Parking Lot Guidance. Wireless Communications and Mobile Computing. V6639558,1-6 (SCI)

(4)    Zifan Guo , Pingping Wang , Zhendong Liu* , Yuming Zhao (2020). Discrimination of Thermophilic Proteins and Non-thermophilic Proteins Using Feature imension Reduction. Frontiers in Bioengineering and Biotechnology,8(584807),1-10 (Q2)

(5) Zhendong Liu*, Daming Zhu,Qionghai Dai(2019). Improved Predicting Algorithm of RNA Pseudoknotted Structure, International Journal of Computational  Science and Engineering. DOI: 10.1504/IJCSE 10010413

(6) [Invited Speaker]  Zhendong Liu*,Gang Li,Patrick Wang.(2019,July).The Improved Algorithm of Barrier Tree in RNA Folding Structure Based on BHG. 15th International Conference on Machine Learning and Data Mining.New York.USA.

(7)Monographs: Zhendong Liu.(2019). Predicting Algorithm and Computational Complexity of  RNA Folding Structure. China Science Press, Beijing,China

(8) Invention Patent: Zhendong Liu, Yuejun Li,Hengfei Li et al. Predicting method and apparatus  for RNA folding structure based on extended structure with pseudoknotes.

Granted China Patent Number: ZL201910367639.6 

(9) Research Projects: Zhendong Liu. National Natural Science Foundation of China: Research on Predicting Algorithm and Complexity of  RNA Folding Structure including Pseudoknotes, NSFC:61672328, 630,000.

(10) Research Projects: Zhendong Liu. the Luoyang Branch of Henan Tobacco Monopoly Administration Bureau, No: 2020410300270078, 500,000.

 

Selected Presentations

 

[Keynote Speaker:]

Zhendong Liu*,Gang Li,Patrick Wang(2019,July).The Computing Algorithm of Barrier Tree Based on the BHG in RNA Structure. 14th International Conference on Mass Data Analysis of Images and Signal, New York.USA.

[Invited Speaker:]

Zhendong Liu*,Gang Li,Patrick Wang.(2019,July).The Improved Algorithm of Barrier Tree in RNA Folding Structure Based on BHG. 15th International Conference on Machine Learning and Data Mining.New York.USA.

 

 

Industry Collaboration/Tool Development

 

Collaboration with FutureLab Artificial Intelligence Lab, Germany
 

 

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